BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F12LP1|AL425909
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1616 1593 0.0
>3x_Contig1616
Length = 10468
Score = 1593 bits (801), Expect = 0.0
Identities = 817/823 (99%), Gaps = 1/823 (0%)
Strand = Plus / Plus
Query: 1 gatcctgggatgcgatatctttttagagagcatctttgcaaagacatgtgtgcagaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8719 gatcctgggatgcgatatctttttagagagcatctttgcaaagacatgtgtgcagaaaac 8778
Query: 61 ctagacgtatactttgaaataacgaagtttttaaaaagaatgtcggttctgcgaaaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8779 ctagacgtatactttgaaataacgaagtttttaaaaagaatgtcggttctgcgaaaactc 8838
Query: 121 attgagtctcgaaaccagagcgaacacaataagatggatctaagggaatggaaaactggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8839 attgagtctcgaaaccagagcgaacacaataagatggatctaagggaatggaaaactggt 8898
Query: 181 ggtagtactaaactgaaagatacaattcaatcagctcttttaaaacaaactagcgaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8899 ggtagtactaaactgaaagatacaattcaatcagctcttttaaaacaaactagcgaatgc 8958
Query: 241 ctttcgctggtttaccatatttactcctcttatattgcactggggtctccgtatcaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8959 ctttcgctggtttaccatatttactcctcttatattgcactggggtctccgtatcaactt 9018
Query: 301 aatattgatcataacgttagagaaacaattactggaataatattccaccctcagtctcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9019 aatattgatcataacgttagagaaacaattactggaataatattccaccctcagtctcca 9078
Query: 361 actaaaactgcgttcgacacttcaggcaaggaaaattgttcaagagccatttcggatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9079 actaaaactgcgttcgacacttcaggcaaggaaaattgttcaagagccatttcggatgca 9138
Query: 421 tctgttaatagacccttaagcctcgatcctgctgcccggaagaaatgcgtggagcataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9139 tctgttaatagacccttaagcctcgatcctgctgcccggaagaaatgcgtggagcataaa 9198
Query: 481 gtacaatcccatagtaacacgtcaatgccattggcgccgacacctcttaataagggtact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9199 gtacaatcccatagtaacacgtcaatgccattggcgccgacacctcttaataagggtact 9258
Query: 541 gagtcatacgtcattattcatgctatatcaatgttgaaggatttgtatcagttactggaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259 gagtcatacgtcattattcatgctatatcaatgttgaaggatttgtatcagttactggag 9318
Query: 601 aamatcagaaataccgtatttatcatgatgaagaacgactctttgcccaaattcctggca 660
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9319 aaaataagaaataccgtatttatcatgatgaagaacgactctttgcccaaattcctggca 9378
Query: 661 acagaatcgtatagggacgcaatttcattaataactgctaacaagtagaacctaggcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9379 acagaatcgtatagggacgcaatttcattaataactgctaacaagtagaacctaggcatt 9438
Query: 721 tcatcatgaagaataaagatattcatcttgcaaaagawtgtkgccttttctaccaagaaa 780
||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 9439 tcatcatgaagaataaagatattcatc-tgcaaaagaatgtggccttttctaccaagaaa 9497
Query: 781 atggaacattaatgtgacaatatatacatatagacatatataa 823
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9498 atggaacattaatgtgacaatatatacatatagacatatataa 9540
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5921
Number of Sequences: 1807
Number of extensions: 5921
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)